BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033A02SP1|AL429659
(855 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1129 970 0.0
3x_Contig1102 694 0.0
>3x_Contig1129
Length = 3849
Score = 970 bits (489), Expect = 0.0
Identities = 490/491 (99%)
Strand = Plus / Plus
Query: 1 gatcggtaacgcgttccagttgttacatttgaatcccaaagtgcaagccgtgaaagtaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3350 gatcggtaacgcgttccagttgttacatttgaatcccaaagtgcaagccgtgaaagtaga 3409
Query: 61 gtgtggattgtctcaagatgattactcgmtagaatatatcaaagagttggttagacgtgg 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3410 gtgtggattgtctcaagatgattactcgctagaatatatcaaagagttggttagacgtgg 3469
Query: 121 tatatcagtgatagggcatataggattgactccacaaagagtccattcactaggcgggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3470 tatatcagtgatagggcatataggattgactccacaaagagtccattcactaggcgggta 3529
Query: 181 caaggcccagggtggtcaacagagcactgatgctgtggcgttgtacaacgttagtcaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3530 caaggcccagggtggtcaacagagcactgatgctgtggcgttgtacaacgttagtcaaac 3589
Query: 241 tttgcaacagatcggatgtttcggtattgtattggaatgtattccgcataagatatcttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3590 tttgcaacagatcggatgtttcggtattgtattggaatgtattccgcataagatatcttc 3649
Query: 301 tgtcatcacggacaaattacacattcccaccattggtatcggtgcaggcccagatactag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3650 tgtcatcacggacaaattacacattcccaccattggtatcggtgcaggcccagatactag 3709
Query: 361 tggccaggtgttggtgcaatctgacgttcttgggatgcttcccggacataaaccgaaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3710 tggccaggtgttggtgcaatctgacgttcttgggatgcttcccggacataaaccgaaatt 3769
Query: 421 tgttaaaatgttcgcagattttaagaaggacgctgtttctgctttgtctcagtacgttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3770 tgttaaaatgttcgcagattttaagaaggacgctgtttctgctttgtctcagtacgttca 3829
Query: 481 agaagttcatg 491
|||||||||||
Sbjct: 3830 agaagttcatg 3840
>3x_Contig1102
Length = 3442
Score = 694 bits (350), Expect = 0.0
Identities = 364/366 (99%), Gaps = 2/366 (0%)
Strand = Plus / Minus
Query: 491 gataaatctttcccacatataggccaccacactttcaaagtaaacgatgaagtgtaccaa 550
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3435 gataaatctttcc-acatataggccaccacactttcaaagtaaacgatgaagtgtaccaa 3377
Query: 551 gattttatttctaagatagatactgagtgaacagtctttttgaaagatatttcggtgcct 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3376 gattttatttctaagatagatactgagtgaacagtctttttgaaagatatttcggtgcct 3317
Query: 611 attcattatttattctacattatttgagaaatctaaagtctcaccc-aactcgggacaaa 669
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3316 attcattatttattctacattatttgagaaatctaaagtctcaccccaactcgggacaaa 3257
Query: 670 agcatctatcttttaattcgttaaactcagataagaactctagtttctctttaggttctc 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3256 agcatctatcttttaattcgttaaactcagataagaactctagtttctctttaggttctc 3197
Query: 730 taaagtactccccactcagaagaaatgttccccagtggataccaagagcagtttgcgcat 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3196 taaagtactccccactcagaagaaatgttccccagtggataccaagagcagtttgcgcat 3137
Query: 790 ccaaatcattcatgatcttgatgacttctgctgggtttatatgtcgaggcctttgatgcc 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3136 ccaaatcattcatgatcttgatgacttctgctgggtttatatgtcgaggcctttgatgcc 3077
Query: 850 attcgg 855
||||||
Sbjct: 3076 attcgg 3071
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5853
Number of Sequences: 1807
Number of extensions: 5853
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 2
length of query: 855
length of database: 10,358,551
effective HSP length: 16
effective length of query: 839
effective length of database: 10,329,639
effective search space: 8666567121
effective search space used: 8666567121
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)